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  5. Sro426_g140290.1

Sro426_g140290.1 (Contig1720.g15374)


Aliases : Contig1720.g15374

Description : Putative calmodulin-like protein


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro426_g140290.1
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000178.66 tig00000178_g12782.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000944.15 tig00000944_g5936.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001388.4 tig00001388_g8574.t1 Caltractin OS=Scherffelia dubia 0.02 OrthoFinder
Cpa|evm.model.tig00021435.44 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.01 OrthoFinder
Cpa|evm.model.tig00021720.13 tig00021720_g23183.t1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder
Dusal.0080s00002.1 33203946 EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD20105 No alias Centrin-like protein [Ensembl]. 0.02 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
XM_003056085.1 MicpuC2_49475, 49475 Calmodulin (CAM) 0.01 OrthoFinder
lcl|BLLF01002061.1_cds_GFH22537.1_17014 HaLaN_20015, GFH22537 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32961.1_3745 PRW32961 Calmodulin 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 66
IPR002048 EF_hand_dom 124 183
No external refs found!