1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro4255_g353540.1

Sro4255_g353540.1 (Contig2877.g22997)


Aliases : Contig2877.g22997

Description : Ankyrin repeat protein


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro4255_g353540.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Sro1256_g256680.1 Contig2043.g17573 Ankyrin repeat protein 0.04 OrthoFinder
Sro1457_g274370.1 Contig749.g8553 Ankyrin repeat protein 0.09 OrthoFinder
Sro1890_g303740.1 Contig981.g9968 Ankyrin repeat protein 0.03 OrthoFinder
Sro213_g088360.1 Contig1149.g10976 Ankyrin repeat protein 0.03 OrthoFinder
Sro257_g100800.1 Contig2018.g17259 Ankyrin repeat protein 0.04 OrthoFinder
Sro2733_g335780.1 Contig1688.g15122 Ankyrin repeat protein 0.05 OrthoFinder
Sro2733_g335800.1 Contig1688.g15124 Ankyrin repeat protein 0.05 OrthoFinder
Sro2733_g335820.1 Contig1688.g15126 Ankyrin repeat protein 0.05 OrthoFinder
Sro3429_g347940.1 Contig1653.g14876 Ankyrin repeat protein 0.05 OrthoFinder
Sro34_g021810.1 Contig4590.g34284 Ankyrin repeat protein 0.05 OrthoFinder
Sro3763_g350880.1 Contig2382.g19553 Ankyrin repeat protein 0.04 OrthoFinder
Sro567_g167920.1 Contig3851.g29648 Ankyrin repeat protein 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!