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  5. Sro423_g139810.1

Sro423_g139810.1


Description : Hybrid signal transduction histidine kinase


Gene families : OG_01_0000154 (OrthoFinder) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro423_g139810.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.67 tig00000851_g4912.t1 No description available 0.02 OrthoFinder
Sro690_g187680.1 Contig137.g1529 Peroxide stress-activated histidine kinase 0.05 OrthoFinder
TP22G01720.1 No alias GAF domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000595.1_cds_GFH13286.1_7763 HaLaN_09138, GFH13286 Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 615 725
No external refs found!