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  5. Sro422_g139700.1

Sro422_g139700.1 (Contig292.g3818)


Aliases : Contig292.g3818

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro422_g139700.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Sro1026_g232840.1 Contig4072.g31220 Hypothetical protein 0.07 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.04 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.05 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.03 OrthoFinder
Sro168_g074640.1 Contig1642.g14795 Hypothetical protein 0.07 OrthoFinder
Sro1821_g299750.1 Contig1361.g12537 Hypothetical protein 0.03 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.07 OrthoFinder
Sro2157_g316910.1 Contig1177.g11216 Hypothetical protein 0.03 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.04 OrthoFinder
Sro2603_g332380.1 Contig841.g9269 Retrotransposon protein 0.05 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.06 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.08 OrthoFinder
Sro2770_g336730.1 Contig4147.g31666 Hypothetical protein 0.05 OrthoFinder
Sro2776_g336840.1 Contig650.g7770 Hypothetical protein 0.07 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.06 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.05 OrthoFinder
Sro291_g109530.1 Contig4055.g31099 Hypothetical protein 0.03 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.08 OrthoFinder
Sro3043_g342690.1 Contig2893.g23072 Hypothetical protein 0.03 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.04 OrthoFinder
Sro494_g154230.1 Contig3119.g24788 Retrotransposon protein 0.03 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.04 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.03 OrthoFinder
Sro833_g208530.1 Contig120.g1359 Retrotransposon protein 0.04 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.03 OrthoFinder
Sro833_g208560.1 Contig120.g1362 Retrotransposon protein 0.04 OrthoFinder
Sro924_g220810.1 Contig112.g1263 Hypothetical protein 0.1 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!