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  5. Sro419_g139180.1

Sro419_g139180.1 (Contig4415.g33179)


Aliases : Contig4415.g33179

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0014464 (OrthoFinder) Phylogenetic Tree(s): OG0014464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro419_g139180.1
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
EOD10256 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD16528 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
EOD37468 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 98
IPR002048 EF_hand_dom 144 209
No external refs found!