Sro419_g138990.1 (Contig4415.g33160)

Aliases : Contig4415.g33160

Description : Retinal-specific ATP-binding cassette transporter

Gene families : OG_01_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro419_g138990.1
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g151400	30787934	Solute transport.primary active transport.ABC...	0.02	OrthoFinder
Cre14.g613950	30776402	ABC transporter A family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cre14.g618400	30776085	Solute transport.primary active transport.ABC...	0.03	OrthoFinder
PTI_20G02290.1	No alias	ABC transporter-like; ABC-2 family transporter protein...	0.03	OrthoFinder
PTI_24G01170.1	No alias	ABC-2 family transporter protein; ABC transporter-like...	0.02	OrthoFinder
lcl\|LHPG02000013.1_cds_PRW44292.1_2126	PRW44292	ABC transporter A family member 7-like isoform A	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	629	776
IPR003439	ABC_transporter-like_ATP-bd	1612	1755

External Links

No external refs found!