Sro4183_g353300.1 (Contig152.g1716)


Aliases : Contig152.g1716

Description : ESCRT-related protein


Gene families : OG_01_0003320 (OrthoFinder) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro4183_g353300.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cz01g16250.t1 No alias Snf7 family [Interproscan]. 0.02 OrthoFinder
EOD15763 No alias Snf7 family [Interproscan]. 0.04 OrthoFinder
OT_01G05920.1 No alias Snf7 family [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60243.1_4769 PRW60243 Charged multivesicular body 1-like 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 14 166
No external refs found!