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  5. Sro414_g138260.1

Sro414_g138260.1 (Contig453.g6101)


Aliases : Contig453.g6101

Description : Linked kinase-associated serine/threonine phosphatase 2C


Gene families : OG_01_0000057 (OrthoFinder) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro414_g138260.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cz01g00100.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Cz17g01030.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.04 OrthoFinder
Dusal.0162s00017.1 33196126 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Dusal.0229s00015.1 33187449 PPM-type phosphatase domain [Interproscan]. 0.03 OrthoFinder
Dusal.2352s00001.1 33185275 PPM-type phosphatase domain [Interproscan]. 0.04 OrthoFinder
PTI_08G02920.1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
TP01G09030.1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
TP03G07900.1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54290 54290 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_58761 58761 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_60219 60219 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0010.1 32897406 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Vocar.0008s0131.1 32896939 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0022s0165.1 32891855 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0037s0027.1 32897578 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000027.1_cds_GFH06204.1_681 HaLaN_00795, GFH06204 PPM-type phosphatase domain-containing protein 0.01 OrthoFinder
lcl|BLLF01003548.1_cds_GFH27620.1_22097 HaLaN_25976, GFH27620 PPM-type phosphatase domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498475.1_7428 KAA8498475 Putative protein phosphatase 2C 10 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499107.1_8060 KAA8499107 Protein phosphatase 2C-like 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006474 N-terminal protein amino acid acetylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Enrichment
BP GO:0018206 peptidyl-methionine modification IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Enrichment
CC GO:0031417 NatC complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 28 127
IPR001932 PPM-type_phosphatase_dom 438 592
No external refs found!