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  5. Sro4143_g353160.1

Sro4143_g353160.1 (Contig1243.g11621)


Aliases : Contig1243.g11621

Description : Hypothetical protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro4143_g353160.1
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
Sro1045_g234990.1 Contig324.g4308 Hypothetical protein 0.03 OrthoFinder
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.06 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.08 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.03 OrthoFinder
Sro1696_g291850.1 Contig219.g2593 Hypothetical protein 0.04 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.12 OrthoFinder
Sro2157_g316910.1 Contig1177.g11216 Hypothetical protein 0.11 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.04 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.1 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.1 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.06 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.08 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.11 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.04 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.04 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.04 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.06 OrthoFinder
Sro833_g208530.1 Contig120.g1359 Retrotransposon protein 0.06 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.03 OrthoFinder
Sro833_g208560.1 Contig120.g1362 Retrotransposon protein 0.09 OrthoFinder
Sro924_g220810.1 Contig112.g1263 Hypothetical protein 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!