Aliases : Contig2922.g23262
Description : Chloroplastic
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro412_g137900.1 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre08.g365900 | 30773702, LHCSR1 | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder | |
Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
EOD03771 | No alias | Light-harvesting family [Ensembl]. | 0.03 | OrthoFinder | |
EOD03774 | No alias | Light-harvesting family [Ensembl]. | 0.03 | OrthoFinder | |
EOD05780 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
EOD06468 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD08607 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
EOD09836 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD15375 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD19744 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
EOD20807 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
EOD20809 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD25053 | No alias | Light-harvesting family [Ensembl]. | 0.03 | OrthoFinder | |
EOD25560 | No alias | Light harvesting protein [Ensembl]. | 0.01 | OrthoFinder | |
EOD35878 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
PTI_01G10030.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.11 | OrthoFinder | |
PTI_02G03310.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
PTI_05G00320.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.09 | OrthoFinder | |
PTI_07G04400.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
PTI_14G03460.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.09 | OrthoFinder | |
Sro149_g068330.1 | Contig259.g3201 | Chloroplastic | 0.03 | OrthoFinder | |
TP08G04750.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
TP19G02190.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
TP23G00990.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
TP23G01260.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
TP23G01270.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
TP23G01280.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
XM_002506509.1 | MICPUN_105009, 105009 | Chlorophyll a/b-binding protein (LI818R) | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
BP | GO:0006865 | amino acid transport | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
CC | GO:0009523 | photosystem II | IEP | Enrichment |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
BP | GO:0015849 | organic acid transport | IEP | Enrichment |
BP | GO:0015979 | photosynthesis | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
BP | GO:0017038 | protein import | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 23 | 182 |
No external refs found! |