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  5. Sro412_g137830.1

Sro412_g137830.1 (Contig2922.g23255)


Aliases : Contig2922.g23255

Description : Hypothetical protein


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro412_g137830.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Sro1182_g249960.1 Contig4113.g31393 Hypothetical protein 0.03 OrthoFinder
Sro160_g072100.1 Contig2985.g23706 Hypothetical protein 0.07 OrthoFinder
Sro1697_g291900.1 Contig3875.g29819 Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro1942_g306740.1 Contig2861.g22939 Hypothetical protein 0.06 OrthoFinder
Sro2085_g313830.1 Contig3037.g24219 Harbinger transposase-derived nuclease domain [Interproscan]. 0.08 OrthoFinder
Sro262_g102081.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.02 OrthoFinder
Sro2659_g333930.1 Contig1681.g15098 Hypothetical protein 0.08 OrthoFinder
Sro292_g109750.1 Contig484.g6545 Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro3100_g343730.1 Contig1645.g14850 Hypothetical protein 0.04 OrthoFinder
Sro382_g131091.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro471_g149640.1 Contig458.g6177 Hypothetical protein 0.02 OrthoFinder
Sro514_g158140.1 Contig3991.g30655 Hypothetical protein 0.04 OrthoFinder
Sro608_g174820.1 Contig3978.g30565 Harbinger transposase-derived nuclease domain [Interproscan]. 0.04 OrthoFinder
Sro712_g191290.1 Contig2484.g20334 Harbinger transposase-derived nuclease domain [Interproscan]. 0.02 OrthoFinder
Sro76_g041480.1 Contig184.g2126 Hypothetical protein 0.09 OrthoFinder
Sro76_g041500.1 Contig184.g2128 Harbinger transposase-derived nuclease domain [Interproscan]. 0.06 OrthoFinder
Sro996_g229350.1 Contig2630.g21349 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!