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  5. Sro40_g024590.1

Sro40_g024590.1 (Contig335.g4466)


Aliases : Contig335.g4466

Description : RING finger domain protein


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro40_g024590.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.59 tig00000792_g4210.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cpa|evm.model.tig00020684.6 tig00020684_g12854.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cpa|evm.model.tig00020943.22 tig00020943_g16264.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cz16g11080.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD07947 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
PTI_22G01940.1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000750.1_cds_GFH14648.1_9125 HaLaN_10746, GFH14648 RING-type domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 434 497
No external refs found!