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  5. Sro407_g136730.1

Sro407_g136730.1 (Contig2478.g20264)


Aliases : Contig2478.g20264

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro407_g136730.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cre16.g650350 30777392 No description available 0.02 OrthoFinder
PTI_01G09540.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro111_g055130.1 Contig567.g7190 Hypothetical protein 0.03 OrthoFinder
Sro130_g061840.1 Contig2611.g21107 Helicase associated domain 0.02 OrthoFinder
TP02G08220.1 No alias Helicase-associated [Interproscan]. 0.03 OrthoFinder
TP03G07370.1 No alias Helicase-associated [Interproscan]. 0.03 OrthoFinder
TP14G03000.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 199 260
IPR005114 Helicase_assoc 418 475
IPR005114 Helicase_assoc 120 183
IPR005114 Helicase_assoc 349 408
IPR005114 Helicase_assoc 56 113
No external refs found!