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  5. Sro400_g135110.1

Sro400_g135110.1 (Contig1256.g11754)


Aliases : Contig1256.g11754

Description : Extracellular solute-binding protein


Gene families : OG_01_0002026 (OrthoFinder) Phylogenetic Tree(s): OG0002026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro400_g135110.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
Sro1561_g282570.1 Contig3759.g28828 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro166_g074010.1 Contig1709.g15280 Extracellular solute-binding protein 0.06 OrthoFinder
Sro244_g097050.1 Contig2788.g22421 Extracellular solute-binding protein 0.05 OrthoFinder
Sro2576_g331740.1 Contig3418.g26640 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro328_g118720.1 Contig3574.g27627 Extracellular solute-binding protein 0.03 OrthoFinder
Sro786_g202260.1 Contig1324.g12239 Putative amino-acid ABC transporter-binding protein YhdW 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!