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  5. Sro400_g134980.1

Sro400_g134980.1 (Contig1256.g11741)


Aliases : Contig1256.g11741

Description : Probable periplasmic serine endoprotease DegP-like


Gene families : OG_01_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro400_g134980.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498500 30793568, DEG11 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
Dusal.0010s00005.1 33196819 Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
EOD07113 No alias PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
EOD16062 No alias PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.01 OrthoFinder
EOD22299 No alias PDZ domain 6; Trypsin-like peptidase domain [Interproscan]. 0.02 OrthoFinder
XM_002505564.1 MICPUN_109418, 109418 PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.01 OrthoFinder
XM_003058382.1 MicpuC2_57938, 57938 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59774.1_6697 PRW59774 Protease Do-like chloroplastic isoform X1 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495633.1_1631 KAA8495633 Protease Do-like 1, chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 333 432
No external refs found!