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  5. Sro39_g023950.1

Sro39_g023950.1 (Contig234.g2815)


Aliases : Contig234.g2815

Description : Hypothetical protein


Gene families : OG_01_0000436 (OrthoFinder) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro39_g023950.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Sro1091_g240290.1 Contig2884.g23030 Hypothetical protein 0.03 OrthoFinder
Sro1091_g240300.1 Contig2884.g23031 Hypothetical protein 0.05 OrthoFinder
Sro1193_g251190.1 Contig4499.g33742 Hypothetical protein 0.07 OrthoFinder
Sro1193_g251200.1 Contig4499.g33743 Hypothetical protein 0.1 OrthoFinder
Sro1212_g252900.1 Contig211.g2509 Hypothetical protein 0.03 OrthoFinder
Sro1249_g256020.1 Contig2393.g19615 Hypothetical protein 0.04 OrthoFinder
Sro1279_g258880.1 Contig4725.g35081 Hypothetical protein 0.05 OrthoFinder
Sro1491_g277090.1 Contig3009.g24026 Hypothetical protein 0.05 OrthoFinder
Sro1544_g281250.1 Contig2133.g17983 Hypothetical protein 0.02 OrthoFinder
Sro1646_g288290.1 Contig464.g6220 Hypothetical protein 0.06 OrthoFinder
Sro2235_g320200.1 Contig1457.g13351 Hypothetical protein 0.09 OrthoFinder
Sro225_g091860.1 Contig1661.g14984 Hypothetical protein 0.03 OrthoFinder
Sro332_g119410.1 Contig1165.g11128 Hypothetical protein 0.03 OrthoFinder
Sro3438_g348020.1 Contig1145.g10956 Hypothetical protein 0.03 OrthoFinder
Sro4202_g353370.1 Contig1199.g11318 Hypothetical protein 0.05 OrthoFinder
Sro541_g163160.1 Contig3996.g30681 Hypothetical protein 0.02 OrthoFinder
Sro605_g174210.1 Contig514.g6787 Hypothetical protein 0.08 OrthoFinder
Sro71_g039390.1 Contig2582.g20962 Hypothetical protein 0.06 OrthoFinder
Sro760_g198310.1 Contig3371.g26392 Hypothetical protein 0.09 OrthoFinder
Sro760_g198310.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro797_g203930.1 Contig4746.g35169 Hypothetical protein 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!