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  5. Sro399_g134800.1

Sro399_g134800.1 (Contig279.g3607)


Aliases : Contig279.g3607

Description : Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein


Gene families : OG_01_0000131 (OrthoFinder) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro399_g134800.1
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.102 tig00000403_g364.t1 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder
Cz14g17060.t1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
PTI_19G02540.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
XM_003061698.1 MicpuC2_35342, 35342 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
lcl|BLLF01002106.1_cds_GFH22714.1_17191 HaLaN_20222, GFH22714 Ubiquitin carboxyl-terminal hydrolase 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494891.1_3421 KAA8494891 Ubiquitin carboxyl-terminal hydrolase 22-A 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 227 563
No external refs found!