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  5. Sro397_g134540.1

Sro397_g134540.1 (Contig157.g1792)


Aliases : Contig157.g1792

Description : 60 kDa chaperonin (Fragment)


Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro397_g134540.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001269.7 tig00001269_g7978.t1 External stimuli response.temperature.Hsp... 0.01 OrthoFinder
Cre06.g309100 30779697, CPN60C External stimuli response.temperature.Hsp... 0.1 OrthoFinder
Dusal.0053s00010.1 33186582 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
Dusal.0055s00013.1 33187644 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
Dusal.0817s00005.1 33195411 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
OT_10G00300.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
PTI_01G07800.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2.82 2.82 Chaperonin Cpn60/TCP-1 family; Peptidase M42; GroES... 0.02 OrthoFinder
SymbC1.scaffold3006.11 3006.11 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
TP18G01070.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
TPCG02240.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54720 54720 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
XM_002499843.1 MICPUN_105208, 105208 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
XM_002499999.1 MICPUN_98964, 98964 Chaperonin 60 beta (CPN-60) 0.01 OrthoFinder
XM_003057833.1 MicpuC2_33182, 33182 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
XM_003064714.1 MicpuC2_43728, 43728 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003392.1_cds_GFH27211.1_21688 HaLaN_25499, GFH27211 RuBisCO large subunit-binding protein subunit alpha 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61354.1_599 PRW61354 Ru large subunit-binding subunit chloroplastic isoform A 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44921.1_1734 PRW44921 Chaperonin mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 51 558
No external refs found!