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  5. Sro391_g133160.1

Sro391_g133160.1 (Contig2759.g22217)


Aliases : Contig2759.g22217

Description : UPF0126 inner membrane protein YadS


Gene families : OG_01_0002600 (OrthoFinder) Phylogenetic Tree(s): OG0002600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro391_g133160.1
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
OT_20G00440.1 No alias Uncharacterised domain UPF0126 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR005115 UPF0126 97 171
IPR005115 UPF0126 190 264
No external refs found!