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  5. Sro390_g132850.1

Sro390_g132850.1 (Contig4620.g34474)


Aliases : Contig4620.g34474

Description : Histidine--tRNA ligase


Gene families : OG_01_0000761 (OrthoFinder) Phylogenetic Tree(s): OG0000761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro390_g132850.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cre02.g142352 30785235 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cz06g02160.t1 No alias Class II Histidinyl-tRNA synthetase (HisRS)-like... 0.02 OrthoFinder
Cz11g27130.t1 No alias Aromatic amino acid lyase; Class II Histidinyl-tRNA... 0.03 OrthoFinder
Dusal.0128s00025.1 33185280 Class II Histidinyl-tRNA synthetase (HisRS)-like... 0.02 OrthoFinder
Dusal.0387s00008.1 33202112 Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.03 OrthoFinder
EOD37895 No alias Class II Histidinyl-tRNA synthetase (HisRS)-like... 0.02 OrthoFinder
OT_11G03340.1 No alias Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.05 OrthoFinder
OT_14G01170.1 No alias Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.02 OrthoFinder
TP17G00350.1 No alias Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.03 OrthoFinder
Transcript_contig_78819 78819 Class II Histidinyl-tRNA synthetase (HisRS)-like... 0.01 OrthoFinder
Transcript_contig_7953 7953 Hypothetical protein 0.01 OrthoFinder
XM_002509125.1 MICPUN_68035, 68035 Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.06 OrthoFinder
XM_003061537.1 MicpuC2_48335, 48335 Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.05 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59901.1_6743 PRW59901 Histidyl-tRNA synthetase isoform B 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59903.1_6741 PRW59903 Histidyl-tRNA synthetase isoform A 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494724.1_3254 KAA8494724 Histidine--tRNA ligase, cytoplasmic 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041715 HisRS-like_core 88 412
IPR004154 Anticodon-bd 440 516
No external refs found!