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  5. Sro3907_g351830.1

Sro3907_g351830.1 (Contig1097.g10637)


Aliases : Contig1097.g10637

Description : Complex protein 1 subunit zeta


Gene families : OG_01_0002263 (OrthoFinder) Phylogenetic Tree(s): OG0002263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3907_g351830.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.37 tig00000789_g4131.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.01 OrthoFinder
Cre09.g397200 30780237, CCT6 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder
Cz02g02210.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
EOD39434 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
OT_13G02270.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
PTI_19G00150.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Vocar.0008s0243.1 32897465 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
XM_002503159.1 MICPUN_94492, 94492 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003061179.1 MicpuC2_34990, 34990 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002792.1_cds_GFH25355.1_19832 HaLaN_23300, GFH25355 Chaperonin complex component 0.05 OrthoFinder
lcl|BLLF01002792.1_cds_GFH25356.1_19833 HaLaN_23301, GFH25356 T-complex 1 subunit zeta 0.05 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50899.1_999 PRW50899 TCP-1 cpn60 chaperonin family 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498648.1_7601 KAA8498648 T-complex protein 1 subunit zeta 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 34 146
No external refs found!