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  5. Sro38_g023910.1

Sro38_g023910.1 (Contig1551.g14126)


Aliases : Contig1551.g14126

Description : RING


Gene families : OG_01_0001101 (OrthoFinder) Phylogenetic Tree(s): OG0001101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro38_g023910.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Sro1459_g274490.1 Contig2263.g18781 Hypothetical protein 0.04 OrthoFinder
Sro1461_g274790.1 Contig2979.g23686 Hypothetical protein 0.02 OrthoFinder
Sro2118_g315310.1 Contig3689.g28458 Hypothetical protein 0.04 OrthoFinder
Sro233_g094290.1 Contig310.g4090 Hypothetical protein 0.03 OrthoFinder
Sro663_g183510.1 Contig119.g1349 Hypothetical protein 0.04 OrthoFinder
Sro986_g228100.1 Contig4404.g33095 Hypothetical protein 0.01 OrthoFinder
Sro986_g228110.1 Contig4404.g33096 Hypothetical protein 0.03 OrthoFinder
Sro994_g228990.1 Contig3591.g27751 Hypothetical protein 0.04 OrthoFinder
Sro9_g007760.1 Contig4120.g31544 RING 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!