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  5. Sro388_g132430.1

Sro388_g132430.1 (Contig4393.g33017)


Aliases : Contig4393.g33017

Description : Probable prolyl 4-hydroxylase


Gene families : OG_01_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro388_g132430.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
PTI_16G02250.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
TP04G07500.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
TP06G06430.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.03 OrthoFinder
TP09G01550.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
TP13G02010.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
TP18G00310.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54185 54185 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
Vocar.0005s0336.1 32883946 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
Vocar.0022s0100.1 32891880 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
Vocar.0026s0035.1 32892466 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
XM_002508342.1 MICPUN_71136, 71136 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01004075.1_cds_GFH28868.1_23345 HaLaN_27428, GFH28868 ShKT domain; Oxoglutarate/iron-dependent dioxygenase... 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57801.1_8393 PRW57801 Putative prolyl 4-hydroxylase 9 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32516.1_3990 PRW32516 Putative prolyl 4-hydroxylase 6 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR003582 ShKT_dom 123 158
IPR003582 ShKT_dom 231 265
IPR003582 ShKT_dom 76 111
IPR003582 ShKT_dom 34 64
IPR005123 Oxoglu/Fe-dep_dioxygenase 440 540
No external refs found!