1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro388_g132380.1

Sro388_g132380.1 (Contig4393.g33012)


Aliases : Contig4393.g33012

Description : Prolyl 4-hydroxylase subunit alpha-2


Gene families : OG_01_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro388_g132380.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cz03g05260.t1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56805.1_9526 PRW56805 Prolyl 4-hydroxylase subunit alpha-1 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32904.1_3782 PRW32904 Prolyl 4-hydroxylase subunit alpha-2 isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 357 459
IPR003582 ShKT_dom 164 199
IPR003582 ShKT_dom 78 112
No external refs found!