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  5. Sro3881_g351650.1

Sro3881_g351650.1 (Contig1687.g15121)


Aliases : Contig1687.g15121

Description : Mitochondrial


Gene families : OG_01_0000072 (OrthoFinder) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3881_g351650.1
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.31 tig00000383_g24641.t1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder
Cre15.g641200 30783756 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder
Cre16.g672650 30778052 Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder
EOD18712 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
PTI_01G07230.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold379.3 379.3 Mitochondrial substrate/solute carrier [Interproscan]. 0.08 OrthoFinder
TP01G11050.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
TP10G02940.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004448 isocitrate dehydrogenase activity IEP Enrichment
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 9 70
No external refs found!