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  5. Sro385_g131770.1

Sro385_g131770.1 (Contig3292.g25859)


Aliases : Contig3292.g25859

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro385_g131770.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Dusal.0930s00003.1 33193956 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD30504 No alias PA domain; Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_10G01940.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1315.2 1315.2 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001387.1_cds_GFH18974.1_13451 HaLaN_15858, GFH18974 RING-type domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004334 fumarylacetoacetase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Enrichment
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 165 211
No external refs found!