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  5. Sro383_g131340.1

Sro383_g131340.1 (Contig132.g1499)


Aliases : Contig132.g1499

Description : Pleiotropic ABC efflux transporter of multiple drugs CDR1


Gene families : OG_01_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro383_g131340.1
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
XM_003063811.1 MicpuC2_65914, 65914 ATP-binding cassette superfamily 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60808.1_4492 PRW60808 Pleiotropic drug resistance 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 823 978
IPR003439 ABC_transporter-like_ATP-bd 174 345
IPR013525 ABC_2_trans 500 709
IPR013525 ABC_2_trans 1126 1338
No external refs found!