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  5. Sro382_g131091.1

Sro382_g131091.1


Description : Harbinger transposase-derived nuclease domain [Interproscan].


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro382_g131091.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Sro1182_g249960.1 Contig4113.g31393 Hypothetical protein 0.03 OrthoFinder
Sro160_g072100.1 Contig2985.g23706 Hypothetical protein 0.03 OrthoFinder
Sro1697_g291900.1 Contig3875.g29819 Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder
Sro412_g137830.1 Contig2922.g23255 Hypothetical protein 0.05 OrthoFinder
Sro76_g041500.1 Contig184.g2128 Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 39 185
No external refs found!