Sro379_g130470.1 (Contig3398.g26564)

Aliases : Contig3398.g26564

Description : Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial

Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro379_g130470.1
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g278098	30778609, MCC1	Amino acid metabolism.degradation.branched-chain amino...	0.08	OrthoFinder
Cz15g20050.t1	No alias	Carbamoyl-phosphate synthetase large subunit-like,...	0.05	OrthoFinder
Dusal.0086s00005.1	33192759	Carbamoyl-phosphate synthetase large subunit-like,...	0.02	OrthoFinder
PTI_03G04110.1	No alias	Biotin/lipoyl attachment; Biotin carboxylase,...	0.04	OrthoFinder
Transcript_contig_55755	55755	Biotin carboxylase, C-terminal; Propionyl-coenzyme A...	0.01	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497406.1_1135	KAA8497406	Propionyl-CoA carboxylase alpha chain, mitochondrial	0.03	OrthoFinder
lcl\|VRMN01000004.1_cds_KAA8494651.1_3181	KAA8494651	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0016714	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005481	BC-like_N	28	137
IPR000089	Biotin_lipoyl	655	721
IPR005482	Biotin_COase_C	367	481
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	143	353

External Links

No external refs found!