Aliases : Contig4671.g34727
Description : Probable RNA-binding protein EIF1AD
Gene families : OG_01_0002987 (OrthoFinder) Phylogenetic Tree(s): OG0002987_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro3736_g350710.1 | |
Cluster | HCCA: Cluster_283 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
OT_06G03000.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
PTI_12G04070.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
Transcript_contig_57900 | 57900 | RNA-binding domain, S1, IF1 type [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0019s0063.1 | 32892864 | RNA-binding domain, S1, IF1 type [Interproscan]. | 0.01 | OrthoFinder | |
XM_003062071.1 | MicpuC2_41853, 41853 | RNA-binding domain, S1, IF1 type [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0003743 | translation initiation factor activity | IEA | Interproscan |
BP | GO:0006413 | translational initiation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005047 | signal recognition particle binding | IEP | Enrichment |
MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006605 | protein targeting | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
MF | GO:0033218 | amide binding | IEP | Enrichment |
BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
MF | GO:0042277 | peptide binding | IEP | Enrichment |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006196 | RNA-binding_domain_S1_IF1 | 28 | 100 |
No external refs found! |