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  5. Sro355_g125000.1

Sro355_g125000.1 (Contig2977.g23658)


Aliases : Contig2977.g23658

Description : Excision repair protein ERCC-8


Gene families : OG_01_0000209 (OrthoFinder) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro355_g125000.1
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
OT_01G03150.1 No alias Zinc finger, C3HC4 type (RING finger) [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 379 414
IPR001680 WD40_repeat 168 201
IPR001680 WD40_repeat 255 292
No external refs found!