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  5. Sro354_g124780.2

Sro354_g124780.2


Description : PiggyBac transposable element-derived protein [Interproscan].


Gene families : OG_01_0002364 (OrthoFinder) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro354_g124780.2
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Sro1022_g232310.1 Contig2862.g22945 PiggyBac transposable element-derived protein [Interproscan]. 0.1 OrthoFinder
Sro1705_g292410.1 Contig4149.g31669 PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
Sro1817_g299490.1 Contig1204.g11336 PiggyBac transposable element-derived protein [Interproscan]. 0.04 OrthoFinder
Sro2036_g312090.1 Contig118.g1341 Hypothetical protein 0.05 OrthoFinder
Sro33_g021190.1 Contig2613.g21140 PiggyBac transposable element-derived protein [Interproscan]. 0.06 OrthoFinder
Sro3459_g348250.1 Contig2360.g19375 PiggyBac transposable element-derived protein [Interproscan]. 0.14 OrthoFinder
Sro347_g122870.1 Contig477.g6455 PiggyBac transposable element-derived protein [Interproscan]. 0.05 OrthoFinder
Sro6_g005660.1 Contig175.g2071 Hypothetical protein 0.07 OrthoFinder
Sro832_g208500.1 Contig3251.g25666 Hypothetical protein 0.1 OrthoFinder
Sro832_g208510.1 Contig3251.g25667 PiggyBac transposable element-derived protein [Interproscan]. 0.1 OrthoFinder
Sro845_g209950.1 Contig2192.g18247 Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR029526 PGBD 14 410
No external refs found!