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  5. Sro351_g124000.1

Sro351_g124000.1 (Contig4381.g32954)


Aliases : Contig4381.g32954

Description : Respiration control sensor protein ArcB


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro351_g124000.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000190.17 tig00000190_g13838.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.02 OrthoFinder
Cpa|evm.model.tig00020610.13 tig00020610_g11951.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Sro1466_g275080.1 Contig2211.g18351 Peroxide stress-activated histidine kinase mak2 0.04 OrthoFinder
Sro14_g010640.1 Contig1128.g10813 Respiration control sensor protein ArcB 0.04 OrthoFinder
Sro164_g073700.1 Contig4339.g32744 Peroxide stress-activated histidine kinase mak2 0.03 OrthoFinder
Sro1908_g304730.1 Contig1938.g16673 Peroxide stress-activated histidine kinase mak2 0.03 OrthoFinder
Sro2185_g318140.1 Contig1553.g14129 Peroxide stress-activated histidine kinase mak2 0.04 OrthoFinder
Sro287_g108630.1 Contig252.g3104 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
Sro325_g117780.1 Contig3568.g27567 Respiration control sensor protein ArcB 0.06 OrthoFinder
Sro33_g021480.1 Contig2613.g21169 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro419_g139190.1 Contig4415.g33180 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro419_g139200.1 Contig4415.g33181 Histidine kinase 0.04 OrthoFinder
Sro433_g141880.1 Contig4540.g33950 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro548_g164350.1 Contig1714.g15315 Sensor protein kinase WalK (Fragment) 0.07 OrthoFinder
Sro728_g193740.1 Contig1495.g13658 Hybrid signal transduction histidine kinase 0.02 OrthoFinder
SymbC1.scaffold2.34 2.34 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.01 OrthoFinder
TP22G01730.1 No alias Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01001311.1_cds_GFH18511.1_12988 HaLaN_15330, GFH18511 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003144.1_cds_GFH26486.1_20963 HaLaN_24644, GFH26486 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01008570.1_cds_GFH33431.1_27908 HaLaN_32803, GFH33431 Chlamyopsin-6 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 786 898
IPR003594 HATPase_C 613 724
IPR006189 CHASE_dom 182 370
No external refs found!