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  5. Sro3469_g348360.1

Sro3469_g348360.1 (Contig4528.g33911)


Aliases : Contig4528.g33911

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3469_g348360.1
Cluster HCCA: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
Sro1130_g244450.1 Contig1486.g13575 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1693_g291660.1 Contig4594.g34333 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro1771_g296630.1 Contig3831.g29377 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro282_g107600.1 Contig1420.g13103 Hypothetical protein 0.03 OrthoFinder
Sro538_g162600.1 Contig95.g1101 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro735_g194890.1 Contig2764.g22261 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro994_g229000.1 Contig3591.g27752 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro994_g229020.1 Contig3591.g27754 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 134 230
No external refs found!