Sro343_g121870.1 (Contig2616.g21238)


Aliases : Contig2616.g21238

Description : Propionyl-CoA carboxylase beta chain


Gene families : OG_01_0000806 (OrthoFinder) Phylogenetic Tree(s): OG0000806_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro343_g121870.1
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Cz01g14170.t1 No alias Acetyl-CoA carboxylase [Interproscan]. 0.01 OrthoFinder
PTI_00G00180.1 No alias Acetyl-CoA carboxylase [Interproscan]. 0.04 OrthoFinder
PTI_08G02700.1 No alias Acetyl-CoA carboxylase [Interproscan]. 0.07 OrthoFinder
Transcript_contig_53828 53828 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_55498 55498 Acetyl-CoA carboxylase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000584.1_cds_GFH13179.1_7656 HaLaN_09011, GFH13179 Putative methylcrotonoyl-CoA carboxylase beta chain,... 0.01 OrthoFinder
lcl|BLLF01000584.1_cds_GFH13180.1_7657 HaLaN_09012, GFH13180 Acetyl-CoA carboxylase [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59753.1_6438 PRW59753 Propionyl-carboxylase beta mitochondrial 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496883.1_612 KAA8496883 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR034733 AcCoA_carboxyl 79 561
No external refs found!