Sro3438_g348020.1 (Contig1145.g10956)


Aliases : Contig1145.g10956

Description : Hypothetical protein


Gene families : OG_01_0000436 (OrthoFinder) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3438_g348020.1
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
Sro1058_g236420.1 Contig518.g6832 Hypothetical protein 0.05 OrthoFinder
Sro1091_g240300.1 Contig2884.g23031 Hypothetical protein 0.02 OrthoFinder
Sro1193_g251200.1 Contig4499.g33743 Hypothetical protein 0.03 OrthoFinder
Sro1279_g258880.1 Contig4725.g35081 Hypothetical protein 0.03 OrthoFinder
Sro1356_g265670.1 Contig4429.g33236 Hypothetical protein 0.02 OrthoFinder
Sro1491_g277090.1 Contig3009.g24026 Hypothetical protein 0.02 OrthoFinder
Sro1537_g280720.1 Contig3053.g24296 Hypothetical protein 0.03 OrthoFinder
Sro1646_g288290.1 Contig464.g6220 Hypothetical protein 0.03 OrthoFinder
Sro1676_g290510.1 Contig3487.g27040 Hypothetical protein 0.03 OrthoFinder
Sro263_g102320.1 Contig612.g7554 Hypothetical protein 0.03 OrthoFinder
Sro332_g119410.1 Contig1165.g11128 Hypothetical protein 0.04 OrthoFinder
Sro39_g023950.1 Contig234.g2815 Hypothetical protein 0.03 OrthoFinder
Sro605_g174210.1 Contig514.g6787 Hypothetical protein 0.04 OrthoFinder
Sro760_g198310.1 Contig3371.g26392 Hypothetical protein 0.03 OrthoFinder
Sro760_g198310.2 No alias Hypothetical protein 0.03 OrthoFinder
Sro768_g199580.1 Contig2130.g17963 Hypothetical protein 0.06 OrthoFinder
Sro922_g220650.1 Contig2958.g23508 Hypothetical protein 0.03 OrthoFinder
Sro976_g226990.1 Contig4239.g32122 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!