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  5. Sro341_g121580.1

Sro341_g121580.1 (Contig3952.g30290)


Aliases : Contig3952.g30290

Description : Myb-related protein A


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro341_g121580.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cre09.g399067 30780866 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder
Cz01g31240.t1 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
EOD39718 No alias Myb-like DNA-binding domain [Interproscan]. 0.03 OrthoFinder
PTI_10G00850.1 No alias SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
PTI_29G00320.1 No alias SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
XM_002506751.1 MICPUN_74639, 74639 SANT/Myb domain [Interproscan]. 0.03 OrthoFinder
XM_002507505.1 MICPUN_55061, 55061 MYB transcription factor-like protein 0.02 OrthoFinder
lcl|BLLF01000133.1_cds_GFH08051.1_2528 HaLaN_02951, GFH08051 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000566.1_cds_GFH13015.1_7492 HaLaN_08814, GFH13015 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000902.1_cds_GFH15798.1_10275 HaLaN_12098, GFH15798 Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20403.1_5601 PRW20403 Myb-related B isoform B 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 117 161
IPR001005 SANT/Myb 219 261
IPR001005 SANT/Myb 167 213
No external refs found!