Aliases : Contig3791.g29117
Description : Protein L28, chloroplastic
Gene families : OG_01_0004076 (OrthoFinder) Phylogenetic Tree(s): OG0004076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro339_g121110.1 | |
Cluster | HCCA: Cluster_215 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g265800 | 30779397, PRPL28 | Protein biosynthesis.organelle translation... | 0.1 | OrthoFinder | |
Cz10g11070.t1 | No alias | Ribosomal protein L28/L24 [Interproscan]. | 0.06 | OrthoFinder | |
OT_03G03000.1 | No alias | Ribosomal protein L28/L24 [Interproscan]. | 0.08 | OrthoFinder | |
PTI_07G02030.1 | No alias | Ribosomal protein L28/L24 [Interproscan]. | 0.04 | OrthoFinder | |
SymbC1.scaffold4683.2 | 4683.2 | Ribosomal protein L28/L24 [Interproscan]. | 0.01 | OrthoFinder | |
Transcript_contig_55901 | 55901 | Ribosomal protein L28/L24 [Interproscan]. | 0.02 | OrthoFinder | |
Vocar.0002s0214.1 | 32890627 | Ribosomal protein L28/L24 [Interproscan]. | 0.03 | OrthoFinder | |
XM_002501193.1 | MICPUN_57559, 57559 | Ribosomal protein L28/L24 [Interproscan]. | 0.03 | OrthoFinder | |
XM_003062275.1 | MicpuC2_52044, 52044 | Ribosomal protein L28/L24 [Interproscan]. | 0.03 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56591.1_9479 | PRW56591 | 50S ribosomal L28 | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006414 | translational elongation | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
MF | GO:0015035 | protein-disulfide reductase activity | IEP | Enrichment |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Enrichment |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
CC | GO:0031090 | organelle membrane | IEP | Enrichment |
CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR026569 | Ribo_L28/L24 | 48 | 107 |
No external refs found! |