Sro339_g120980.1 (Contig3791.g29104)


Aliases : Contig3791.g29104

Description : Ribosylation factor 1


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro339_g120980.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Cre12.g535900 30792839, ARL1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder
Cz02g22080.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
TP01G10350.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
TP17G01490.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Vocar.0043s0071.1 32886888 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002018.1_cds_GFH22339.1_16816 HaLaN_19791, GFH22339 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Enrichment
BP GO:0009298 GDP-mannose biosynthetic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019673 GDP-mannose metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 178
No external refs found!