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  5. Sro338_g120920.1

Sro338_g120920.1 (Contig15.g129)


Aliases : Contig15.g129

Description : Leucine Rich Repeat


Gene families : OG_01_0000303 (OrthoFinder) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro338_g120920.1
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
Sro1268_g257740.1 Contig4283.g32362 Receptor-like 0.05 OrthoFinder
Sro342_g121800.1 Contig3070.g24480 Leucine Rich Repeat 0.03 OrthoFinder
Sro451_g145730.1 Contig1599.g14517 Leucine Rich Repeat 0.03 OrthoFinder
Sro603_g174020.1 Contig4246.g32161 Leucine Rich Repeat 0.04 OrthoFinder
Sro7_g005850.1 Contig389.g5238 Leucine Rich Repeat 0.04 OrthoFinder
Sro7_g006110.1 Contig389.g5264 Leucine Rich Repeat 0.03 OrthoFinder
Sro92_g048170.1 Contig486.g6577 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 205 220
IPR001611 Leu-rich_rpt 353 372
No external refs found!