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  5. Sro3378_g347421.1

Sro3378_g347421.1


Description : BTB/POZ domain [Interproscan].


Gene families : OG_01_0000120 (OrthoFinder) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3378_g347421.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Sro118_g057840.1 Contig2714.g21854 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro118_g057850.1 Contig2714.g21855 Hypothetical protein 0.03 OrthoFinder
Sro1842_g301050.1 Contig2247.g18620 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro225_g091780.1 Contig1661.g14976 BTB/POZ domain [Interproscan]. 0.04 OrthoFinder
Sro3009_g342080.1 Contig1048.g10333 BTB POZ domain containing 0.03 OrthoFinder
Sro550_g164720.1 Contig731.g8402 BACK 0.03 OrthoFinder
Sro701_g189850.1 Contig2013.g17196 BTB/POZ domain [Interproscan]. 0.05 OrthoFinder
Sro791_g203010.1 Contig1638.g14767 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro89_g046850.1 Contig3846.g29606 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro900_g217860.1 Contig2813.g22564 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0004650 polygalacturonase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 22 140
No external refs found!