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  5. Sro3277_g346140.1

Sro3277_g346140.1 (Contig1303.g12096)


Aliases : Contig1303.g12096

Description : Hypothetical protein


Gene families : OG_01_0000303 (OrthoFinder) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3277_g346140.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro2032_g311900.1 Contig3520.g27239 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro451_g145710.1 Contig1599.g14515 Hypothetical protein 0.05 OrthoFinder
Sro45_g027110.1 Contig2311.g19093 Hypothetical protein 0.03 OrthoFinder
Sro590_g171920.2 No alias Hypothetical protein 0.03 OrthoFinder
Sro7_g005950.1 Contig389.g5248 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro7_g006040.1 Contig389.g5257 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment

No InterPro domains available for this sequence

No external refs found!