1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro323_g117240.1

Sro323_g117240.1 (Contig364.g4905)


Aliases : Contig364.g4905

Description : Myc-type, basic helix-loop-helix (bHLH) domain [Interproscan].


Gene families : OG_01_0015107 (OrthoFinder) Phylogenetic Tree(s): OG0015107_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro323_g117240.1
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
PTI_07G02550.1 No alias Myc-type, basic helix-loop-helix (bHLH) domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011598 bHLH_dom 306 359
No external refs found!