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  5. Sro321_g116830.1

Sro321_g116830.1 (Contig56.g439)


Aliases : Contig56.g439

Description : Putative calmodulin-like protein


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro321_g116830.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000944.15 tig00000944_g5936.t1 No description available 0.01 OrthoFinder
Cre03.g150300 30787530 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Dusal.0231s00017.1 33188196 Hypothetical protein 0.01 OrthoFinder
EOD13029 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
EOD20717 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD20718 No alias EF-hand domain pair [Interproscan]. 0.02 OrthoFinder
OT_05G03010.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
PTI_27G00410.1 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1382.9 1382.9 EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497936.1_6889 KAA8497936 Calmodulin 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494184.1_4048 KAA8494184 Caltractin 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 88 150
IPR002048 EF_hand_dom 17 77
No external refs found!