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  5. Sro3214_g345410.2

Sro3214_g345410.2


Description : PDZ domain; Tail specific protease [Interproscan].


Gene families : OG_01_0000478 (OrthoFinder) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3214_g345410.2
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001532.10 tig00001532_g9277.t1 C-terminal processing peptidase, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00001532.11 tig00001532_g9277.t1 Carboxyl-terminal-processing peptidase 3, chloroplastic... 0.03 OrthoFinder
Cre06.g265850 30778480, TCP2 Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder
Cre10.g420550 30790857 Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494545.1_3075 KAA8494545 Carboxyl-terminal-processing protease 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR005151 Tail-specific_protease 196 362
IPR001478 PDZ 91 165
No external refs found!