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  5. Sro3186_g344880.1

Sro3186_g344880.1 (Contig1814.g15987)


Aliases : Contig1814.g15987

Description : MSMEG_5435/MSMEI_5285


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3186_g344880.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Sro1945_g306990.1 Contig3128.g24832 Hypothetical protein 0.02 OrthoFinder
Sro1989_g309700.1 Contig4094.g31277 D-alanine--D-alanyl carrier protein ligase 0.05 OrthoFinder
Sro2284_g321900.1 Contig2109.g17902 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro329_g118820.1 Contig2017.g17252 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro410_g137380.1 Contig1741.g15519 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro613_g175590.1 Contig1327.g12249 Hypothetical protein 0.06 OrthoFinder
Sro653_g181920.1 Contig4252.g32184 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro653_g181950.1 Contig4252.g32187 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0016209 antioxidant activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 2 213
IPR000866 AhpC/TSA 1606 1733
No external refs found!