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  5. Sro3174_g344760.1

Sro3174_g344760.1 (Contig2888.g23045)


Aliases : Contig2888.g23045

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3174_g344760.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Sro1026_g232840.1 Contig4072.g31220 Hypothetical protein 0.03 OrthoFinder
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.04 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.03 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.02 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.03 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.03 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.03 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.03 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.02 OrthoFinder
Sro924_g220810.1 Contig112.g1263 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!