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  5. Sro314_g115170.1

Sro314_g115170.1 (Contig2448.g20043)


Aliases : Contig2448.g20043

Description : Hypothetical protein


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro314_g115170.1
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
Sro116_g056940.1 Contig2228.g18470 ECF subfamily RNA polymerase sigma-24 subunit 0.05 OrthoFinder
Sro293_g110000.1 Contig3203.g25321 Hypothetical protein 0.04 OrthoFinder
Sro314_g115060.1 Contig2448.g20032 Thaumatin-like protein 0.03 OrthoFinder
Sro39_g023990.1 Contig234.g2819 Intercellular signal essential for a variety of... 0.08 OrthoFinder
Sro8_g006620.1 Contig89.g975 Intercellular signal essential for a variety of... 0.03 OrthoFinder
Sro8_g006670.1 Contig89.g980 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro8_g006670.2 No alias Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!