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  5. Sro312_g114470.1

Sro312_g114470.1 (Contig2832.g22692)


Aliases : Contig2832.g22692

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro312_g114470.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Sro1283_g259110.1 Contig1308.g12124 Hypothetical protein 0.04 OrthoFinder
Sro1294_g260190.1 Contig1650.g14870 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro190_g082030.1 Contig3488.g27078 Hypothetical protein 0.04 OrthoFinder
Sro200_g084740.1 Contig201.g2365 Hypothetical protein 0.03 OrthoFinder
Sro205_g086350.1 Contig2217.g18448 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro2159_g317020.1 Contig1250.g11681 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro2184_g318100.1 Contig1506.g13760 Hypothetical protein 0.06 OrthoFinder
Sro2344_g324160.1 Contig1082.g10518 Hypothetical protein 0.03 OrthoFinder
Sro241_g096370.1 Contig4317.g32555 Hypothetical protein 0.03 OrthoFinder
Sro2868_g339040.1 Contig4519.g33863 Hypothetical protein 0.03 OrthoFinder
Sro3820_g351270.1 Contig3428.g26700 Hypothetical protein 0.05 OrthoFinder
Sro489_g153320.1 Contig402.g5441 Hypothetical protein 0.03 OrthoFinder
Sro489_g153330.1 Contig402.g5442 Hypothetical protein 0.02 OrthoFinder
Sro534_g161811.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro697_g189030.1 Contig3345.g26202 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009539 photosystem II reaction center IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 154 263
No external refs found!