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  5. Sro3109_g343920.1

Sro3109_g343920.1 (Contig3616.g27949)


Aliases : Contig3616.g27949

Description : Mitotic spindle assembly checkpoint protein MAD2A


Gene families : OG_01_0003413 (OrthoFinder) Phylogenetic Tree(s): OG0003413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3109_g343920.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre08.g380400 30773742, MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.01 OrthoFinder
PTI_12G00490.1 No alias HORMA domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1924.6 1924.6 HORMA domain [Interproscan]. 0.01 OrthoFinder
TP09G00580.1 No alias HORMA domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56956 56956 HORMA domain [Interproscan]. 0.01 OrthoFinder
Vocar.0042s0027.1 32892064 HORMA domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493070.1_2806 KAA8493070 Mitotic spindle assembly checkpoint protein MAD2A 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003511 HORMA_dom 12 195
No external refs found!